If you want multiple instances, then you must change each occurrence of the name of the variable, e.g.One can use eg CML, but this must be as a server request. Note that only the MDL molfile is supported in this mode (which makes no server-side requests). The key data will be located in the path wp-content/uploads/5-trans.mol which you should upload.TransformBallAndStick2.loadMolecule(molecule) Var molecule =ChemDoodle.readMOL(molFile, 2) HttpGet('wp-content/uploads/5-trans.mol') So that you can see the whole line here, I show it in wrapped form (which you must not use) The key requirement is that the body of the script (starting with var) must not contain any line breaks it must be a single wide line.You can put the folder elsewhere if you modify the path in the script accordingly. From here, get the ChemDoodle components and put them into the directory immediately above the WordPress installation.(or whatever theme you use) and in the file header.php, paste the following Procedure for creating a 3D model in a WordPress blog post using ChemDoodle. If you get the impression that the task of a modern communicator of science and chemistry is not merely that of penning well chosen words to describe their topic, but of having to program their effort, then you may not be mistaken. I may give a try at embedding this into the blog. A new entrant is GLmol, an open source molecular viewer for Apple’s IOS.When that happens, ChemDoodle components on this blog will start working. As of this moment, one essential component, WebGL, is only available to developers of Apple’s IOS system, but I expect this to become generally available soon. I have tidied up the recipe for invoking it since then, and this is given below for anyone interested in implementing it. One early adopter of the Javascript/WebGL HTML5 model has been ChemDoodle, which I illustrated on this blog about a year ago.These two properties mean that Javascript/HTML5 implementations make a lot of use of server-side functionality in other words a lot of bytes may have to flow between server and mobile device to achieve a desired effect (and the user may have to pay for these bytes via their data plan). The other difference is that whereas a signed Java applet allows data to escape from the security Sandbox (and into eg a file system), Javascript is likely to be much more restrictive. Its viability has been greatly increased by very large improvements in the speeds that browsers interpret Javascript nowadays, but this speed is unlikely to ever match that of Java. Whereas Java is a compiled language, Javascript is interpreted on-the-fly by the browser. In practice, this means that any molecular viewer would be based on a combination of Javascript and WebGL technologies. Apple has been prominent in touting HTML5 as a Java replacement.
Chemdoodle 3d windows 8#
Chemdoodle 3d android#
An Android version of Jmol was recently released, to rave reviews! I do not know however whether the Jmol on these posts can be viewed via Android.Jmol is based on Java, which has been adopted by Google’s Android mobile operating system, but not by Apple’s IOS.I thought I might review progress since then, with a particular focus on using the new generations of mobile device that have subsequently emerged. Many of my subsequent efforts have indeed invoked Jmol. My very first post on this blog, in 2008, was to describe how Jmol could be used to illustrate chemical themes by adding 3D models to posts.